Join Graph Components

In case the graph is not connected, join the components. This function updates the original adjacency matrix and returns a new object.

JoinGraphComponents(
  root_cell,
  adjacency_matrix,
  flat_distances,
  n_components,
  component_members
)

Arguments

root_cell	the root cell of the lineage tree
adjacency_matrix	the graph embedding of the cells
flat_distances	the flattened embedding of the cells
n_components	the number of components
component_members	a list of vectors containing the cells in each component

Value

adjacency_matrix such that new edges between disconnected components have length 2