Get rank correlation for pseudotime analysis
GetCorrelation(cluster_order_by, cell_metric, graph_cluster_mst, root_cluster)
| cluster_order_by | cluster rank parameter for measuring cluster/cell rank correlation |
|---|---|
| cell_metric | either distance or index |
| graph_cluster_mst | igraph object representing an mst on the cluster-cluster graph |
| root_cluster | the id of the root cluster on the cluster-cluster graph |
tau score of rank correlation